AtCoreSpecMAT.h

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// =================================================
//  AtCore Class
//  Original author : Genie Jhang ( geniejhang@majimak.com )
//  Adapted for AtTPCROOT by Y. Ayyad (ayyadlim@nscl.msu.edu)
// =================================================
 
#ifndef _ATCORESPECMAT_H_
#define _ATCORESPECMAT_H_
 
#include "AtMap.h"
#include "AtPedestal.h"
#include "AtRawEvent.h"
#include "AtSpecMATMap.h"
#include "AtTpcMap.h"
#include "AtTpcProtoMap.h"
 
#include <TClonesArray.h>
#include <TFile.h>
#include <TObject.h>
#include <TString.h>
#include <TTree.h>
#include <TTreeReader.h>
#include <TTreeReaderArray.h>
 
#include "GETDecoder2.h"
 
#include <tuple>
 
class AtCoreSpecMAT : public TObject {
private:
   Int_t fNumTbs;
 
   GETDecoder2 *fDecoderPtr[16];
   Bool_t fIsData;
 
   AtPedestal *fPedestalPtr[16];
   Bool_t fIsNegativePolarity[4];
   Double_t fFPNSigmaThreshold;
 
   AtRawEvent *fRawEventPtr;
   TClonesArray *fPadArray;
 
   Int_t fCurrentEventID[16];
   Int_t fTargetFrameID;
 
   Bool_t fIsSeparatedData;
 
   /* old map style
   Int_t kOpt;
   TString fIniMap;
   TString fLowgMap;
   TString fXtalkMap;
   Bool_t GetIsAuxChannel(Int_t val);
   Bool_t kEnableAuxChannel;
   std::vector<Int_t> fAuxChannels;
   AtMap *fAtMapPtr;
   */
   // new map style
   std::shared_ptr<AtSpecMATMap> fMap;
 
   TString fFileName;
 
   Int_t fNumCobo;
 
   Int_t fFPNChannels[4][4][4][4][512];
   Bool_t fIsPadPlaneCobo[4];
 
#ifndef __CINT__
   typedef boost::multi_array<double, 3> multiarray;
   typedef multiarray::index index;
   multiarray AtPadCoordArr;
#endif //__CINT__
 
   Bool_t kDebug;
 
public:
   AtCoreSpecMAT();
   AtCoreSpecMAT(std::shared_ptr<AtSpecMATMap> map);
   AtCoreSpecMAT(TString filename, std::shared_ptr<AtSpecMATMap> map);
   AtCoreSpecMAT(TString filename, Int_t numTbs, Int_t windowNumTbs = 512, Int_t windowStartTb = 0);
   ~AtCoreSpecMAT();
 
   void Initialize();
 
   // setters
   Bool_t AddData(TString filename, Int_t coboIdx = 0);
   void SetPositivePolarity(Bool_t *value);
   Bool_t SetData(Int_t value);
   Int_t GetNumData(Int_t coboIdx = 0);
   TString GetDataName(Int_t index, Int_t coboIdx = 0);
   void SetNumTbs(Int_t value);
   void SetFPNPedestal(Double_t sigmaThreshold = 5);
   void SetPseudoTopologyFrame(Int_t asadMask, Bool_t check = kFALSE);
   void SetAuxChannel(std::vector<Int_t> AuxCh);
   void SetNumCobo(Int_t numCobo);
   void SetIsPadPlaneCobo(Bool_t *IsPadPlane); // Sets whether cobo belongs reads out padplane
                                               // signals or scintillator signals
 
   void SetMap(std::shared_ptr<AtSpecMATMap> map) { fMap = map; }
 
   void GetFPNChannelsFromROOTFILE(Long64_t EventNr);
   void ProcessROOTFILE(Long64_t EventNr);
 
   Bool_t SetWriteFile(TString filename, Int_t coboIdx = 0, Bool_t overwrite = kFALSE);
   void WriteData();
 
   // getters
   AtRawEvent *GetRawEvent(Long64_t eventID = -1); 
   Int_t GetEventID();                             
   Int_t GetNumTbs(Int_t coboIdx = 0);             
   Int_t GetFPNChannel(Int_t chIdx);
   TString GetFileName() const { return fFileName; }
 
   ClassDef(AtCoreSpecMAT, 2);
};
 
#endif